PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sevir.6G238800.3.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
Family bZIP
Protein Properties Length: 345aa    MW: 37865.2 Da    PI: 7.9679
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sevir.6G238800.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.61e-112452533
                        CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLee 33
                        k  rr+++NReAAr+sR+RKka+i++Le 
  Sevir.6G238800.3.p 24 KTVRRLAQNREAARKSRLRKKAYIQQLES 52
                        5679***********************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.1E-52095IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.8642266IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.0E-82264No hitNo description
SuperFamilySSF579592.25E-72457No hitNo description
PfamPF001701.9E-82453IPR004827Basic-leucine zipper domain
PROSITE patternPS0003602742IPR004827Basic-leucine zipper domain
PfamPF141444.9E-28104177IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    Send to blast
MCLLGRQDMA TGSTPKTGKA LDPKTVRRLA QNREAARKSR LRKKAYIQQL ESSKLKLAQM  60
EQDVQRARSQ GLFLGGGPGA NTSSGAAMFD VGYARWLDDH GRRMAELQGA LHSHLPDGDL  120
RAIVDDTLTH HDELFQLKVV AAKSDVSHLI NGAWTTPAER CFLWMGGFRP SDLLKTLLPQ  180
LDPLTEQQVV GICNLQRSSQ EAEEALSQGL EQLHQSLADT MAGGSLIDDI NMSFMGQMAL  240
ALGKLANLEG FVIQADNLRQ QALHQMHRIL TVRQAARCFL AIGEYHNRLR ALSSLWASRP  300
REMLVADEGN CGEISVATQP SQSQFSSLLT HAVELTFSLG AREK*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004978700.10.0PREDICTED: transcription factor HBP-1b(c38)-like
SwissprotO241601e-124TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLK3YKU20.0K3YKU2_SETIT; Uncharacterized protein
STRINGSi014861m0.0(Setaria italica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.21e-140bZIP family protein